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Professor Krasimira Tsaneva-Atanasova

Professor Krasimira Tsaneva-Atanasova

Professor of Mathematics for Healthcare

 3615

 +44 (0)1392 723615

 Living Systems Institute T02.17

 

Living Systems Institute, University of Exeter, Stocker Road, Exeter, EX4 4QD

Overview

My main research interests fall within the area of biomathematics. The ultimate goal is to be able to propose novel applications of mathematics to enable the development of quantitative methods for healthcare and healthcare technologies. My current and future research plans predominantly focus on projects that could make a difference to experimental scientists and clinicians, and potentially society through the applications of mathematics for personalised prediction and decision in prevention, diagnosis or treatment of health related conditions.

View my profile on the Mathematics website.

Research

Publications

Key publications | Publications by category | Publications by year

Key publications


Wedgwood KCA, Richardson SJ, Morgan NG, Tsaneva-Atanasova K (2016). Spatiotemporal dynamics of insulitis in human type 1 diabetes. Frontiers in Physiology, 7 Abstract.  Full text.

Publications by category


Books

Tsaneva-Atanasova K (2009). A Mathematical Study of Calcium Oscillations and Waves. Abstract.

Journal articles

Prince LY, Tsaneva-Atanasova K, Clopath C, Mellor JR (In Press). Acetylcholine disinhibits hippocampal circuits to enable rapid formation of overlapping memory ensembles.  Abstract.
Cama J, Voliotis M, Metz J, Smith A, Iannucci J, Keyser UF, Tsaneva-Atanasova K, Pagliara S (In Press). Antibiotic transport kinetics in Gram-negative bacteria revealed via single-cell uptake analysis and mathematical modelling.  Abstract.
Zavala E, Voliotis M, Zerenner T, Tabak J, Walker JJ, Li XF, Terry JR, Lightman SL, O’Byrne K, Tsaneva-Atanasova K, et al (In Press). Dynamic hormone control of stress and fertility.  Abstract.
Zavala E, Gil-Gómez CA, Wedgwood KCA, Burgess R, Tsaneva-Atanasova K, Herrera-Valdez MA (In Press). Dynamic modulation of glucose utilisation by glucocorticoid rhythms in health and disease.  Abstract.
Challen RJ, Tsaneva-Atanasova K, Pitt M, Edwards T, Gompels L, Lacasa L, Brooks-Pollock E, Martin C, Griffith G, Danon L, et al (In Press). Estimates of regional infectivity of COVID-19 in the United Kingdom following imposition of social distancing measures.  Abstract.
Evans BD, Słowiński PM, Hattersley AT, Jones SE, Sharp SA, Kimmitt RA, Weedon MN, Oram RA, Tsaneva-Atanasova K, Thomas NJM, et al (In Press). Estimating population level disease prevalence using genetic risk scores.  Abstract.
Voliotis M, Li XF, De Burgh R, Lass G, Lightman SL, O’Byrne KT, Tsaneva-Atanasova K (In Press). Mathematical modelling elucidates core mechanisms underpinning GnRH pulse generation.  Abstract.
Zhai C, Alderisio F, Slowinski P, Tsaneva-Atanasova K, Bernardo MD (In Press). Modeling Joint Improvisation between Human and Virtual Players in the. Mirror Game.  Abstract.  Author URL.
Spurr L, Alomran N, Słowiński P, Li M, Bousounis P, Zhang Q, Sein J, Crandall KA, Tsaneva-Atanasova K, Horvath A, et al (In Press). ReQTL – an allele-level measure of variation-expression genomic relationships.  Abstract.
Liu H, Prashant NM, Spurr LF, Bousounis P, Alomran N, Ibeawuchi H, Sein J, Słowiński P, Tsaneva-Atanasova K, Horvath A, et al (In Press). scReQTL: an approach to correlate SNVs to gene expression from individual scRNA-seq datasets.  Abstract.
Pope RJP, Garner KL, Voliotis M, Lay AC, Betin VMS, Tsaneva-Atanasova K, Welsh GI, Coward RJM, McArdle CA (2020). An information theoretic approach to insulin sensing by human kidney podocytes. Molecular and Cellular Endocrinology, 110976-110976. Abstract.  Full text.
Coste A, Bardy BG, Janaqi S, Słowiński P, Tsaneva-Atanasova K, Goupil JL, Marin L (2020). Correction to: Decoding identity from motion: how motor similarities colour our perception of self and others. Psychological Research
Coste A, Bardy BG, Janaqi S, Słowiński P, Tsaneva-Atanasova K, Goupil JL, Marin L (2020). Decoding identity from motion: how motor similarities colour our perception of self and others. Psychological Research Full text.
Challen R, Tsaneva-Atanasova K, Edwards T, Gompels L, Dayer M, Pitt M, Danon L (2020). Factors influencing digital review of pathology test results in an inpatient setting: a cross-sectional study. JAMIA Open Abstract.  Full text.
Słowiński P, Li M, Restrepo P, Alomran N, Spurr LF, Miller C, Tsaneva-Atanasova K, Horvath A (2020). GeTallele: a Method for Analysis of DNA and RNA Allele Frequency Distributions. Frontiers in Bioengineering and Biotechnology, 8, 1021-1021. Abstract.
Mac Aogáin M, Lau KJX, Cai Z, Narayana JK, Purbojati RW, Drautz-Moses DI, Gaultier NE, Jaggi TK, Tiew PY, Ong TH, et al (2020). Metagenomics Reveals a Core Macrolide Resistome Related to Microbiota in Chronic Respiratory Disease. American Journal of Respiratory and Critical Care Medicine, rccm.201911-2202OC. Author URL.  Full text.
S\lowiński P, Al-Ramadhani S, Tsaneva-Atanasova K (2020). Neurologically Motivated Coupling Functions in Models of Motor Coordination. SIAM Journal on Applied Dynamical Systems, 19, 208-232. Full text.
Baldemir H, Avitabile D, Tsaneva-Atanasova K (2020). Pseudo-plateau bursting and mixed-mode oscillations in a model of developing inner hair cells. Communications in Nonlinear Science and Numerical Simulation, 80, 104979-104979. Abstract.  Author URL.  Full text.
Spurr LF, Alomran N, Bousounis P, Reece-Stremtan D, Prashant NM, Liu H, Słowiński P, Li M, Zhang Q, Sein J, et al (2020). ReQTL: identifying correlations between expressed SNVs and gene expression using RNA-sequencing data. Bioinformatics, 36(5), 1351-1359. Abstract.  Author URL.  Full text.
Cama J, Voliotis M, Metz J, Smith A, Iannucci J, Keyser UF, Tsaneva-Atanasova K, Pagliara S (2020). Single-cell microfluidics facilitates the rapid quantification of antibiotic accumulation in Gram-negative bacteria. Lab on a Chip, 20(15), 2765-2775. Abstract.  Full text.
Tiew PY, Ko FWS, Narayana JK, Poh ME, Xu H, Neo HY, Loh L-C, Ong C-K, Aogáin MM, Tan JHY, et al (2020). ‘HIGH RISK’ CLINICAL AND INFLAMMATORY CLUSTERS IN COPD OF CHINESE DESCENT. Chest Abstract.  Full text.
Curran JA, Buhl E, Tsaneva-Atanasova K, Hodge JJL (2019). Age-dependent changes in clock neuron structural plasticity and excitability are associated with a decrease in circadian output behaviour and sleep. Neurobiology of Aging Abstract.  Author URL.  Full text.
Challen R, Denny J, Pitt M, Gompels L, Edwards T, Tsaneva-Atanasova K (2019). Artificial intelligence, bias and clinical safety. BMJ Quality & Safety Full text.
Williams CA, Wedgwood KCA, Mohammadi H, Prouse K, Tomlinson OW, Tsaneva-Atanasova K (2019). Cardiopulmonary responses to maximal aerobic exercise in patients with cystic fibrosis. PLoS ONE, 14 Abstract.  Full text.
Prague JK, Voliotis M, Clarke S, Comninos AN, Abbara A, Jayasena CN, Roberts RE, Yang L, Veldhuis JD, Tsaneva-Atanasova K, et al (2019). Determining the relationship between hot flushes and LH pulses in menopausal women using mathematical modelling. The Journal of Clinical Endocrinology & Metabolism Full text.
Słowiński P, Baldemir H, Wood G, Alizadehkhaiyat O, Coyles G, Vine S, Williams G, Tsaneva-Atanasova K, Wilson M (2019). Gaze training supports self-organization of movement coordination in children with developmental coordination disorder. Scientific Reports, 9(1), 1712-1712. Abstract.  Author URL.  Full text.
Zavala E, Wedgwood KCA, Voliotis M, Tabak J, Spiga F, Lightman SL, Tsaneva-Atanasova K (2019). Mathematical Modelling of Endocrine Systems. Trends in Endocrinology & Metabolism, 30(4), 244-257. Full text.
Liang S, Kinghorn AB, Voliotis M, Prague JK, Veldhuis JD, Tsaneva-Atanasova K, McArdle CA, Li RHW, Cass AEG, Dhillo WS, et al (2019). Measuring luteinising hormone pulsatility with a robotic aptamer-enabled electrochemical reader. Nature Communications, 10(1). Abstract.  Author URL.  Full text.
Dhillo W, Liang S, Kinghorn A, Voliotis M, Prague J, Veldhuis J, Tsaneva-Atanasova K, McArdle C, Li HWR, Cass T, et al (2019). SAT-LB040 Measuring LH Pulsatility in Patients with Reproductive Disorders Using a Novel Robotic Aptamer-Enabled Electrochemical Reader (RAPTER). Journal of the Endocrine Society, 3(Supplement_1).
Smith P, Buhl E, Tsaneva-Atanasova K, Hodge JJL (2019). Shaw and Shal voltage-gated potassium channels mediate circadian changes in Drosophila clock neuron excitability. The Journal of Physiology Abstract.  Full text.
Voliotis M, Feng Li X, De Burgh R, Lass G, Lightman SL, O’Byrne KT, Tsaneva-Atanasova K (2019). The origin of GnRH pulse generation: an integrative mathematical-experimental approach. Journal of Neuroscience Abstract.  Full text.
Smith P, Arias R, Sonti S, Odgerel Z, Santa-Maria I, McCabe BD, Tsaneva-Atanasova K, Louis ED, Hodge JJL, Clark LN, et al (2018). A Drosophila Model of Essential Tremor. Scientific Reports, 8(1).
Kusev P, Schaik P, Tsaneva-Atanasova K, Juliusson A, Chater N (2018). Adaptive Anchoring Model: How Static and Dynamic Presentations of Time Series Influence Judgments and Predictions. Cognitive science, 42, 77-102. Full text.
Pratap A, Garner KL, Voliotis M, Tsaneva-Atanasova K, McArdle CA (2018). Authors response to communication about mathematical modeling of gonadotropin-releasing hormone signaling. Molecular and Cellular Endocrinology, 470, 36-37. Full text.
Tait L, Wedgwood K, Tsaneva-Atanasova K, Brown JT, Goodfellow M (2018). Control of clustered action potential firing in a mathematical model of entorhinal cortex stellate cells. J Theor Biol, 449, 23-34. Abstract.  Author URL.  Full text.
C. Zhai, F. Alderisio, P. Słowiński, K. Tsaneva-Atanasova, M. di Bernardo (2018). Design and Validation of a Virtual Player for Studying Interpersonal Coordination in the Mirror Game. IEEE Transactions on Cybernetics, 48(3), 1018-1029. Full text.
Tsaneva-Atanasova K, Diaz-Zuccarini V (2018). Editorial: Mathematics for Healthcare as Part of Computational Medicine. Frontiers in Physiology, 9, 985-985.
Slowinski P, Al-Ramadhani S, Tsaneva-Atanasova KT (2018). Relaxation oscillations and canards in the Jirsa–Kelso excitator model: global flow perspective. The European Physical Journal Special Topics, 227(5), 591-601. Full text.
Ashwin P, Creaser J, Tsaneva-Atanasova K (2018). Sequential escapes: onset of slow domino regime via a saddle connection. The European Physical Journal Special Topics, 227, 1091-1100. Abstract.  Full text.
Creaser J, Tsaneva-Atanasova, Ashwin P (2018). Sequential noise-induced escapes for oscillatory network dynamics. SIAM Journal on Applied Dynamical Systems, 17(1), 500-525. Abstract.  Full text.
Betterton RT, Broad LM, Tsaneva-Atanasova K, Mellor JR (2017). Acetylcholine modulates gamma frequency oscillations in the hippocampus by activation of muscarinic M1 receptors. European Journal of Neuroscience Full text.
Shen Y, Tino P, Tsaneva-Atanasova K (2017). Classification framework for partially observed dynamical systems. Physical Review E, 95(4), 043303-043303-21. Author URL.  Full text.
Ashwin P, Creaser J, Tsaneva-Atanasova K (2017). Fast and slow domino regimes in transient network dynamics. Phys Rev E, 96(5-1). Abstract.  Author URL.  Full text.
Voliotis M, Garner KL, Alobaid H, Tsaneva-Atanasova K, McArdle CA (2017). Gonadotropin-releasing hormone signaling: an information theoretic approach. Molecular and Cellular Endocrinology, 463, 106-115. Author URL.  Full text.
Cohen L, Khoramshahi M, Salesse RN, Bortolon C, Slowinski PM, Zhai C, Tsaneva-Atanasova K, di Bernardo M, Capdevielle D, Marin L, et al (2017). Influence of facial feedback and mind perception during a cooperative human-robot task in schizophrenia. Scientific Reports, 7(1), 15023-15023. Full text.
Garner KL, Voliotis M, Alobaid H, Perrett RM, Pham T, Tsaneva-Atanasova K, McArdle CA (2017). Information Transfer via Gonadotropin-Releasing Hormone Receptors to ERK and NFAT: Sensing GnRH and Sensing Dynamics. Journal of the Endocrine Society, 1, 260-277. Full text.
Pratap A, Garner KL, Voliotis M, Tsaneva-Atanasova K, McArdle CA (2017). Mathematical modeling of gonadotropin-releasing hormone signaling. Molecular and Cellular Endocrinology, 449, 42-55. Full text.
Rahi SJ, Larsch J, Pecani K, Katsov AY, Mansouri N, Tsaneva-Atanasova K, Sontag ED, Cross FR (2017). Oscillatory stimuli differentiate adapting circuit topologies. Nature Methods, 14(10), 1010-1016. Abstract.  Author URL.  Full text.
Słowiński P, Alderisio F, Zhai C, Shen Y, Tino P, Bortolon C, Capdevielle D, Cohen L, Khoramshahi M, Billard A, et al (2017). Unravelling socio-motor biomarkers in schizophrenia. npj Schizophrenia, 3(1). Full text.
Booth CA, Witton J, Nowacki J, Tsaneva-Atanasova K, Jones MW, Randall AD, Brown JT (2016). Altered Intrinsic Pyramidal Neuron Properties and Pathway-Specific Synaptic Dysfunction Underlie Aberrant Hippocampal Network Function in a Mouse Model of Tauopathy. J Neurosci, 36(2), 350-363. Abstract.  Author URL.  Full text.
Avitabile D, Słowiński P, Bardy B, Tsaneva-Atanasova K (2016). Beyond in-phase and anti-phase coordination in a model of joint action. Biological Cybernetics, 110(2), 201-216. Abstract.  Author URL.  Full text.
Atherton LA, Prince LY, Tsaneva-Atanasova K (2016). Bifurcation analysis of a two-compartment hippocampal pyramidal cell model. Journal of Computational Neuroscience, 1-16. Abstract.  Full text.
Griffith T, Tsaneva-Atanasova K, Mellor JR (2016). Control of Ca2+ Influx and Calmodulin Activation by SK-Channels in Dendritic Spines. PLoS Comput Biol, 12(5), e1004949-e1004949. Abstract.  Author URL.  Full text.
Zhai C, Alderisio F, Słowiński P, Tsaneva-Atanasova K, di Bernardo M (2016). Design of a Virtual Player for Joint Improvisation with Humans in the Mirror Game. PLoS ONE, 11(4), e0154361-e0154361. Abstract.  Author URL.  Full text.
Słowiński P, Zhai C, Alderisio F, Salesse R, Gueugnon M, Marin L, Bardy BG, di Bernardo M, Tsaneva-Atanasova K (2016). Dynamic similarity promotes interpersonal coordination in joint action. Journal of the Royal Society Interface, 13(116). Abstract.  Author URL.  Full text.
Słowiński P, Tsaneva-Atanasova K, Krauskopf B (2016). Effects of time-delay in a model of intra- and inter-personal motor coordination. The European Physical Journal Special Topics, 225(13), 2591-2600. Abstract.  Author URL.  Full text.
Mina P, Tsaneva-Atanasova K, Bernardo MD (2016). Entrainment and Control of Bacterial Populations: Anin SilicoStudy over a Spatially Extended Agent Based Model. ACS Synthetic Biology, 5(7), 639-653. Full text.
Movassagh M, Alomran N, Mudvari P, Dede M, Dede C, Kowsari K, Restrepo P, Cauley E, Bahl S, Li M, et al (2016). RNA2DNAlign: nucleotide resolution allele asymmetries through quantitative assessment of RNA and DNA paired sequencing data. Nucleic Acids Research Author URL.  Full text.
Wedgwood KCA, Richardson SJ, Morgan NG, Tsaneva-Atanasova K (2016). Spatiotemporal dynamics of insulitis in human type 1 diabetes. Frontiers in Physiology, 7 Abstract.  Full text.
Tamagnini F, Novelia J, Kerrigan TL, Brown JT, Tsaneva-Atanasova KT, Randall AD (2015). Altered intrinsic excitability of hippocampal CA1 pyramidal neurons in aged PDAPP mice. Front. Cell. Neurosci., 9 Full text.
Iosub R, Avitabile D, Grant L, Tsaneva-Atanasova K, Kennedy H (2015). Calcium-Induced Calcium Release during Action Potential Firing in Developing Inner Hair Cells. Biophysical Journal, 108(5), 1003-1012. Author URL.  Full text.
Vine SJ, Uiga L, Lavric A, Moore LJ, Tsaneva-Atanasova K, Wilson MR (2015). Individual reactions to stress predict performance during a critical aviation incident. Anxiety Stress Coping, 28(4), 467-477. Abstract.  Author URL.  Full text.
Garner KL, Perrett RM, Voliotis M, Bowsher C, Pope GR, Pham T, Caunt CJ, Tsaneva-Atanasova K, McArdle CA (2015). Information Transfer in Gonadotropin-releasing Hormone (GnRH) Signaling. Journal of Biological Chemistry, 291(5), 2246-2259. Full text.
Matyjaszkiewicz A, Venturi E, O’Brien F, Iida T, Nishi M, Takeshima H, Tsaneva-Atanasova KT, Sitsapesan R (2015). Subconductance Gating and Voltage Sensitivity of Sarcoplasmic Reticulum K+ Channels: a Modeling Approach. Biophysical Journal, 109(2), 265-276. Full text.
Perrett RM, Voliotis M, Armstrong SP, Fowkes RC, Pope GR, Tsaneva-Atanasova K, McArdle CA (2014). Pulsatile Hormonal Signaling to Extracellular Signal-Regulated Kinase: Exploring System Sensitivity to Gonadotropin-Releasing Hormone Pulse Frequency and Width. Journal of Biological Chemistry, 289(11), 7873-7883. Full text.
Perrett R, Voliotis M, Armstrong S, Pope G, Tsaneva-Atanasova K, McArdle C (2014). Systems approaches to understanding GnRH signalling. Endocrine Abstracts, 34
Doyle OM, Tsaneva-Atansaova K, Harte J, Tiffin PA, Tino P, Díaz-Zuccarini V (2013). Bridging Paradigms: Hybrid Mechanistic-Discriminative Predictive Models. Biomedical Engineering, IEEE Transactions on, 60(3), 735-742.
Nowacki J, Osinga HM, Tsaneva-Atanasova KT (2013). Continuation-Based Numerical Detection of After-Depolarization and Spike-Adding Thresholds. Neural Computation, 25(4), 877-900. Abstract.  Full text.
Osinga HM, Tsaneva-Atanasova KT (2013). Geometric analysis of transient bursts. CHAOS, 23(4). Author URL.
Mina P, di Bernardo M, Savery NJ, Tsaneva-Atanasova K (2013). Modelling emergence of oscillations in communicating bacteria: a structured approach from one to many cells. J R Soc Interface, 10(78). Abstract.  Author URL.
Perrett RM, Fowkes RC, Caunt CJ, Tsaneva-Atanasova K, Bowsher CG, McArdle CA (2013). Signaling to extracellular signal-regulated kinase from ErbB1 kinase and protein kinase C: feedback, heterogeneity, and gating. J Biol Chem, 288(29), 21001-21014. Abstract.  Author URL.
Venturi E, Matyjaszkiewicz A, Pitt SJ, Tsaneva-Atanasova K, Nishi M, Yamazaki D, Takeshima H, Sitsapesan R (2013). TRIC-B channels display labile gating: evidence from the TRIC-A knockout mouse model. Pflugers Arch, 465(8), 1135-1148. Abstract.  Author URL.  Full text.
Tigaret CM, Tsaneva-Atanasova K, Collingridge GL, Mellor JR (2013). Wavelet transform-based de-noising for two-photon imaging of synaptic Ca2+ transients. Biophys J, 104(5), 1006-1017. Abstract.  Author URL.  Full text.
Benjamin O, Fitzgerald TH, Ashwin P, Tsaneva-Atanasova K, Chowdhury F, Richardson MP, Terry JR (2012). A phenomenological model of seizure initiation suggests network structure may explain seizure frequency in idiopathic generalised epilepsy. J Math Neurosci, 2(1). Abstract.  Author URL.  Full text.
Gorochowski TE, Matyjaszkiewicz A, Todd T, Oak N, Kowalska K, Reid S, Tsaneva-Atanasova KT, Savery NJ, Grierson CS, di Bernardo M, et al (2012). BSim: an agent-based tool for modeling bacterial populations in systems and synthetic biology. PLoS ONE, 7(8). Abstract.  Full text.
Marten F, Tsaneva-Atanasova K, Giuggioli L (2012). Bacterial secretion and the role of diffusive and subdiffusive first passage processes. PLoS One, 7(8). Abstract.  Author URL.  Full text.
Granqvist E, Wysham D, Hazledine S, Kozlowski W, Sun J, Charpentier M, Martins TV, Haleux P, Tsaneva-Atanasova K, Downie JA, et al (2012). Buffering capacity explains signal variation in symbiotic calcium oscillations. Plant Physiol, 160(4), 2300-2310. Abstract.  Author URL.
Osinga HM, Sherman A, Tsaneva-Atanasova K (2012). CROSS-CURRENTS BETWEEN BIOLOGY AND MATHEMATICS: THE CODIMENSION OF PSEUDO-PLATEAU BURSTING. Discrete Contin Dyn Syst Ser A, 32(8), 2853-2877. Abstract.  Author URL.
Tsaneva-Atanasova K, Mina P, Caunt CJ, Armstrong SP, McArdle CA (2012). Decoding GnRH neurohormone pulse frequency by convergent signalling modules. J R Soc Interface, 9(66), 170-182. Abstract.  Author URL.
Tsaneva-Atanasova K, Caunt CJ, Armstrong SP, Perrett RM, McArdle CA (2012). Decoding neurohormone pulse frequency by convergent signalling modules. Biochem Soc Trans, 40(1), 273-278. Abstract.  Author URL.
Finch AR, Caunt CJ, Perrett RM, Tsaneva-Atanasova K, McArdle CA (2012). Dual specificity phosphatases 10 and 16 are positive regulators of EGF-stimulated ERK activity: indirect regulation of ERK signals by JNK/p38 selective MAPK phosphatases. Cell Signal, 24(5), 1002-1011. Abstract.  Author URL.
Nowacki J, Osinga HM, Tsaneva-Atanasova K (2012). Dynamical systems analysis of spike-adding mechanisms in transient bursts. J Math Neurosci, 2(1). Abstract.  Author URL.  Full text.
Galfré E, Pitt SJ, Venturi E, Sitsapesan M, Zaccai NR, Tsaneva-Atanasova K, O'Neill S, Sitsapesan R (2012). FKBP12 activates the cardiac ryanodine receptor Ca2+-release channel and is antagonised by FKBP12.6. PLoS One, 7(2). Abstract.  Author URL.  Full text.
Petrovic MM, Nowacki J, Olivo V, Tsaneva-Atanasova K, Randall AD, Mellor JR (2012). Inhibition of post-synaptic Kv7/KCNQ/M channels facilitates long-term potentiation in the hippocampus. PLoS One, 7(2). Abstract.  Author URL.  Full text.
Kusev P, Tsaneva-Atanasova K, van Schaik P, Chater N (2012). Modeling judgment of sequentially presented categories using weighting and sampling without replacement. Behav Res Methods, 44(4), 1129-1134. Abstract.  Author URL.
Nowacki J, Osinga HM, Brown JT, Randall AD, Tsaneva-Atanasova K (2011). A unified model of CA1/3 pyramidal cells: an investigation into excitability. Prog Biophys Mol Biol, 105(1-2), 34-48. Abstract.  Author URL.
Teka W, Tsaneva-Atanasova K, Bertram R, Tabak J (2011). From plateau to pseudo-plateau bursting: making the transition. Bull Math Biol, 73(6), 1292-1311. Abstract.  Author URL.
Kusev P, Ayton P, van Schaik P, Tsaneva-Atanasova K, Stewart N, Chater N (2011). Judgments relative to patterns: how temporal sequence patterns affect judgments and memory. J Exp Psychol Hum Percept Perform, 37(6), 1874-1886. Abstract.  Author URL.
Szalai R, Tsaneva-Atanasova K, Homer ME, Champneys AR, Kennedy HJ, Cooper NP (2011). Nonlinear models of development, amplification and compression in the mammalian cochlea. Philos Trans a Math Phys Eng Sci, 369(1954), 4183-4204. Abstract.  Author URL.
Rackham OJL, Tsaneva-Atanasova K, Ganesh A, Mellor JR (2010). A Ca-Based Computational Model for NMDA Receptor-Dependent Synaptic Plasticity at Individual Post-Synaptic Spines in the Hippocampus. Front Synaptic Neurosci, 2 Abstract.  Author URL.  Full text.
Osinga HM, Tsaneva-Atanasova KT (2010). Dynamics of plateau bursting depending on the location of its equilibrium. J Neuroendocrinol, 22(12), 1301-1314. Abstract.  Author URL.
Walker JJ, Terry JR, Tsaneva-Atanasova K, Armstrong SP, McArdle CA, Lightman SL (2010). Encoding and decoding mechanisms of pulsatile hormone secretion. J Neuroendocrinol, 22(12), 1226-1238. Abstract.  Author URL.
Tsaneva-Atanasova K, Osinga HM, Riess T, Sherman A (2010). Full system bifurcation analysis of endocrine bursting models. J Theor Biol, 264(4), 1133-1146. Abstract.  Author URL.
Tsaneva-Atanasova K, Osinga HM, Tabak J, Pedersen MG (2010). Modeling mechanisms of cell secretion. Acta Biotheor, 58(4), 315-327. Abstract.  Author URL.
Armstrong SP, Caunt CJ, Fowkes RC, Tsaneva-Atanasova K, McArdle CA (2010). Pulsatile and sustained gonadotropin-releasing hormone (GnRH) receptor signaling: does the ERK signaling pathway decode GnRH pulse frequency?. J Biol Chem, 285(32), 24360-24371. Abstract.  Author URL.
Nowacki J, Mazlan S, Osinga HM, Tsaneva-Atanasova K (2010). The role of large-conductance Calcium-activated (BK) channels in shaping bursting oscillations of a somatotroph cell model. Physica D: Nonlinear Phenomena, 239(9), 485-493.
Tsaneva-Atanasova K, Sherman A (2009). Accounting for near-normal glucose sensitivity in Kir6.2[AAA] transgenic mice. Biophys J, 97(9), 2409-2418. Abstract.  Author URL.
Armstrong SP, Caunt CJ, Fowkes RC, Tsaneva-Atanasova K, McArdle CA (2009). Pulsatile and sustained gonadotropin-releasing hormone (GnRH) receptor signaling: does the Ca2+/NFAT signaling pathway decode GnRH pulse frequency?. J Biol Chem, 284(51), 35746-35757. Abstract.  Author URL.
Tsaneva-Atanasova K, Burgo A, Galli T, Holcman D (2009). Quantifying neurite growth mediated by interactions among secretory vesicles, microtubules, and actin networks. Biophys J, 96(3), 840-857. Abstract.  Author URL.
Tsaneva-Atanasova K, Sherman A, van Goor F, Stojilkovic SS (2007). Mechanism of spontaneous and receptor-controlled electrical activity in pituitary somatotrophs: experiments and theory. J Neurophysiol, 98(1), 131-144. Abstract.  Author URL.
Ong HL, Liu X, Tsaneva-Atanasova K, Singh BB, Bandyopadhyay BC, Swaim WD, Russell JT, Hegde RS, Sherman A, Ambudkar IS, et al (2007). Relocalization of STIM1 for activation of store-operated Ca(2+) entry is determined by the depletion of subplasma membrane endoplasmic reticulum Ca(2+) store. J Biol Chem, 282(16), 12176-12185. Abstract.  Author URL.
Sneyd J, Tsaneva-Atanasova K, Reznikov V, Bai Y, Sanderson MJ, Yule DI (2006). A method for determining the dependence of calcium oscillations on inositol trisphosphate oscillations. Proc Natl Acad Sci U S A, 103(6), 1675-1680. Abstract.  Author URL.
Tsaneva-Atanasova K, Zimliki CL, Bertram R, Sherman A (2006). Diffusion of calcium and metabolites in pancreatic islets: killing oscillations with a pitchfork. Biophys J, 90(10), 3434-3446. Abstract.  Author URL.
Nunemaker CS, Bertram R, Sherman A, Tsaneva-Atanasova K, Daniel CR, Satin LS (2006). Glucose modulates [Ca2+]i oscillations in pancreatic islets via ionic and glycolytic mechanisms. Biophys J, 91(6), 2082-2096. Abstract.  Author URL.
Tsaneva-Atanasova K, Shuttleworth TJ, Yule DI, Thompson JL, Sneyd J (2005). Calcium Oscillations and Membrane Transport: the Importance of Two Time Scales. Multiscale Modeling & Simulation, 3(2), 245-264.
Tsaneva-Atanasova K, Yule DI, Sneyd J (2005). Calcium oscillations in a triplet of pancreatic acinar cells. Biophys J, 88(3), 1535-1551. Abstract.  Author URL.
Sneyd J, Tsaneva-Atanasova K, Yule DI, Thompson JL, Shuttleworth TJ (2004). Control of calcium oscillations by membrane fluxes. Proc Natl Acad Sci U S A, 101(5), 1392-1396. Abstract.  Author URL.
Sneyd J, Tsaneva-Atanasova K, Bruce JIE, Straub SV, Giovannucci DR, Yule DI (2003). A model of calcium waves in pancreatic and parotid acinar cells. Biophys J, 85(3), 1392-1405. Abstract.  Author URL.

Chapters

Voliotis M, Garner KL, Alobaid H, Tsaneva-Atanasova K, McArdle CA (2018). Exploring Dynamics and Noise in Gonadotropin-Releasing Hormone (GnRH) Signaling. In  (Ed) , 405-429.  Abstract.  Author URL.
Wedgwood KCA, Tabak J, Tsaneva-Atanasova K (2018). Modelling Ion Channels. In  (Ed) Mathematical Modelling in Plant Biology, Springer International Publishing, 37-52.
Garner KL, Tsaneva-Atanasova K, McArdle CA (2017). GnRH Action. In Simoni M, Huhtaniemi I (Eds.) Endocrinology of the Testis and Male Reproduction, Springer International Publishing, 1-36.  Full text.
Griffith T, Mellor J, Tsaneva-Atanasova K (2015). Spike-Timing Dependent Plasticity (STDP), Biophysical Models. In  (Ed) Encyclopedia of Computational Neuroscience, Springer New York, 2803-2807.
Griffith T, Mellor J, Tsaneva-Atanasova K (2014). Spike Timing-Dependent Plasticity (STDP), Biophysical Models. In Jaeger D, Jung R (Eds.) Encyclopedia of Computational Neuroscience, Springer New York, 1-5.  Author URL.  Full text.
Champneys A, Tsaneva-Atanasova K (2013). Dynamical Systems Theory, Bifurcation Analysis. In Dubitzky W, Wolkenhauer O, Cho K, Yokota H (Eds.) Encyclopedia of Systems Biology, Springer New York, 632-637.  Author URL.
Sneyd J, Tsaneva-Atanasova K (2003). Modeling Calcium Waves. In Falcke M, Malchow D (Eds.) Understanding Calcium Dynamics, Springer Berlin Heidelberg, 179-199.  Author URL.

Conferences

Mac Aogain M, Kumar JN, Lim AYH, Low TB, Ong TH, Chew FT, Oliver B, Keir HR, Koh MS, Abisheganaden JA, et al (2019). "Integrative Microbiomics" Through Similarity Network Fusion Identifies Clinically Relevant Bronchiectasis Phenotypes.  Author URL.
Buckingham G, Allen K, Vine SJ, Harris DJ, Wood G, Tsaneva-Atanasova K, Wilson MR (2019). Investigating How Prior Knowledge Influences Perception and Action in Developmental Coordination Disorder.  Author URL.
Dhillo W, Liang S, Kinghorn A, Voliotis M, Prague J, Veldhuis J, Tsaneva-Atanasova K, McArdle C, Li R, Cass A, et al (2019). Measuring LH Pulsatility in Patients with Reproductive Disorders Using a Novel Robotic Aptamer-Enabled Electrochemical Reader (RAPTER).  Author URL.
Y. Shen, P. Tino, K. Tsaneva-Atanasova (2017). Classification of sparsely and irregularly sampled time series: a learning in model space approach. 2017 International Joint Conference on Neural Networks (IJCNN). 14th - 19th May 2017.
Coste A, Slowiński P, Tsaneva-Atanasova K, Bardy BG, Marin L (2017). Mapping Individual Postural Signatures.
Zhai C, Alderisio A, Tsaneva-Atanasova KT, di Bernardo M (2015). A Model Predictive Approach to Control the Motion of a Virtual Player in the Mirror Game. 54th Annual Conference on Decision and Control (CDC). 15th - 18th Dec 2015. Full text.
Zhai C, Alderisio F, Tsaneva-Atanasova K, di Bernardo M (2015). A model predictive approach to control the motion of a virtual player in the mirror game. 2015 54th IEEE Conference on Decision and Control (CDC). 15th - 18th Dec 2015.
Zhai C, Alderisio F, Tsaneva-Atanasova K, Di Bernardo M (2014). A novel cognitive architecture for a human-like virtual player in the mirror game. Systems, Man and Cybernetics (SMC), 2014 IEEE International Conference on.  Full text.
Chao Zhai, Alderisio F, Tsaneva-Atanasova K, di Bernardo M (2014). Adaptive tracking control of a virtual player in the mirror game. Decision and Control (CDC), 2014 IEEE 53rd Annual Conference on.  Full text.
Slowinski P, Rooke E, Di Bernardo M, Tsaneva-Atanasova K (2014). Kinematic characteristics of motion in the mirror game. Systems, Man and Cybernetics (SMC), 2014 IEEE International Conference on.  Full text.
Matyjaszkiewicz A, Venturi E, Yamazaki D, Nishi M, Tsaneva-Atanasova K, Takeshima H, Sitsapesan R (2013). Voltage-Dependent Stochastic Gating Models of TRIC-B Channels.  Author URL.
Tsaneva-Atanasova K, Azzopardi N, Galli T, Holcman D (2007). Modeling vesicle trafficking and neurite growth.  Author URL.
Tsaneva-Atanasova K, Nichols C, Arthur S (2006). Accounting for near-normal glucose sensitivity in Kir6.2[AAA] transgenic mice.  Author URL.
Bertram R, Sherman A, Nunemaker CS, Luciani DS, Pedersen MG, Zhang M, Tsaneva-Atanasova K, Satin LS (2006). Evidence that calcium feedback and glycolytic oscillations are both important in pancreatic beta-cells: a computational and experimental study.  Author URL.
Reznikov V, Sneyd J, Tsaneva-Atanasova K, Yule DI (2005). Dependence of CCK induced Ca-i(2+) oscillations on fluctuations in the cytosolic InsP(3) level.  Author URL.
Nunemaker CS, Zhang M, Bertram R, Sherman A, Tsaneva-Atanasova K, Satin LS (2005). Mouse beta-cells and islets differ in glucose responsiveness.  Author URL.

Publications by year


In Press

Prince LY, Tsaneva-Atanasova K, Clopath C, Mellor JR (In Press). Acetylcholine disinhibits hippocampal circuits to enable rapid formation of overlapping memory ensembles.  Abstract.
Cama J, Voliotis M, Metz J, Smith A, Iannucci J, Keyser UF, Tsaneva-Atanasova K, Pagliara S (In Press). Antibiotic transport kinetics in Gram-negative bacteria revealed via single-cell uptake analysis and mathematical modelling.  Abstract.
Zavala E, Voliotis M, Zerenner T, Tabak J, Walker JJ, Li XF, Terry JR, Lightman SL, O’Byrne K, Tsaneva-Atanasova K, et al (In Press). Dynamic hormone control of stress and fertility.  Abstract.
Zavala E, Gil-Gómez CA, Wedgwood KCA, Burgess R, Tsaneva-Atanasova K, Herrera-Valdez MA (In Press). Dynamic modulation of glucose utilisation by glucocorticoid rhythms in health and disease.  Abstract.
Challen RJ, Tsaneva-Atanasova K, Pitt M, Edwards T, Gompels L, Lacasa L, Brooks-Pollock E, Martin C, Griffith G, Danon L, et al (In Press). Estimates of regional infectivity of COVID-19 in the United Kingdom following imposition of social distancing measures.  Abstract.
Evans BD, Słowiński PM, Hattersley AT, Jones SE, Sharp SA, Kimmitt RA, Weedon MN, Oram RA, Tsaneva-Atanasova K, Thomas NJM, et al (In Press). Estimating population level disease prevalence using genetic risk scores.  Abstract.
Voliotis M, Li XF, De Burgh R, Lass G, Lightman SL, O’Byrne KT, Tsaneva-Atanasova K (In Press). Mathematical modelling elucidates core mechanisms underpinning GnRH pulse generation.  Abstract.
Zhai C, Alderisio F, Slowinski P, Tsaneva-Atanasova K, Bernardo MD (In Press). Modeling Joint Improvisation between Human and Virtual Players in the. Mirror Game.  Abstract.  Author URL.
Spurr L, Alomran N, Słowiński P, Li M, Bousounis P, Zhang Q, Sein J, Crandall KA, Tsaneva-Atanasova K, Horvath A, et al (In Press). ReQTL – an allele-level measure of variation-expression genomic relationships.  Abstract.
Liu H, Prashant NM, Spurr LF, Bousounis P, Alomran N, Ibeawuchi H, Sein J, Słowiński P, Tsaneva-Atanasova K, Horvath A, et al (In Press). scReQTL: an approach to correlate SNVs to gene expression from individual scRNA-seq datasets.  Abstract.

2020

Pope RJP, Garner KL, Voliotis M, Lay AC, Betin VMS, Tsaneva-Atanasova K, Welsh GI, Coward RJM, McArdle CA (2020). An information theoretic approach to insulin sensing by human kidney podocytes. Molecular and Cellular Endocrinology, 110976-110976. Abstract.  Full text.
Coste A, Bardy BG, Janaqi S, Słowiński P, Tsaneva-Atanasova K, Goupil JL, Marin L (2020). Correction to: Decoding identity from motion: how motor similarities colour our perception of self and others. Psychological Research
Coste A, Bardy BG, Janaqi S, Słowiński P, Tsaneva-Atanasova K, Goupil JL, Marin L (2020). Decoding identity from motion: how motor similarities colour our perception of self and others. Psychological Research Full text.
Challen R, Tsaneva-Atanasova K, Edwards T, Gompels L, Dayer M, Pitt M, Danon L (2020). Factors influencing digital review of pathology test results in an inpatient setting: a cross-sectional study. JAMIA Open Abstract.  Full text.
Słowiński P, Li M, Restrepo P, Alomran N, Spurr LF, Miller C, Tsaneva-Atanasova K, Horvath A (2020). GeTallele: a Method for Analysis of DNA and RNA Allele Frequency Distributions. Frontiers in Bioengineering and Biotechnology, 8, 1021-1021. Abstract.
Mac Aogáin M, Lau KJX, Cai Z, Narayana JK, Purbojati RW, Drautz-Moses DI, Gaultier NE, Jaggi TK, Tiew PY, Ong TH, et al (2020). Metagenomics Reveals a Core Macrolide Resistome Related to Microbiota in Chronic Respiratory Disease. American Journal of Respiratory and Critical Care Medicine, rccm.201911-2202OC. Author URL.  Full text.
S\lowiński P, Al-Ramadhani S, Tsaneva-Atanasova K (2020). Neurologically Motivated Coupling Functions in Models of Motor Coordination. SIAM Journal on Applied Dynamical Systems, 19, 208-232. Full text.
Baldemir H, Avitabile D, Tsaneva-Atanasova K (2020). Pseudo-plateau bursting and mixed-mode oscillations in a model of developing inner hair cells. Communications in Nonlinear Science and Numerical Simulation, 80, 104979-104979. Abstract.  Author URL.  Full text.
Spurr LF, Alomran N, Bousounis P, Reece-Stremtan D, Prashant NM, Liu H, Słowiński P, Li M, Zhang Q, Sein J, et al (2020). ReQTL: identifying correlations between expressed SNVs and gene expression using RNA-sequencing data. Bioinformatics, 36(5), 1351-1359. Abstract.  Author URL.  Full text.
Cama J, Voliotis M, Metz J, Smith A, Iannucci J, Keyser UF, Tsaneva-Atanasova K, Pagliara S (2020). Single-cell microfluidics facilitates the rapid quantification of antibiotic accumulation in Gram-negative bacteria. Lab on a Chip, 20(15), 2765-2775. Abstract.  Full text.
Tiew PY, Ko FWS, Narayana JK, Poh ME, Xu H, Neo HY, Loh L-C, Ong C-K, Aogáin MM, Tan JHY, et al (2020). ‘HIGH RISK’ CLINICAL AND INFLAMMATORY CLUSTERS IN COPD OF CHINESE DESCENT. Chest Abstract.  Full text.

2019

Mac Aogain M, Kumar JN, Lim AYH, Low TB, Ong TH, Chew FT, Oliver B, Keir HR, Koh MS, Abisheganaden JA, et al (2019). "Integrative Microbiomics" Through Similarity Network Fusion Identifies Clinically Relevant Bronchiectasis Phenotypes.  Author URL.
Curran JA, Buhl E, Tsaneva-Atanasova K, Hodge JJL (2019). Age-dependent changes in clock neuron structural plasticity and excitability are associated with a decrease in circadian output behaviour and sleep. Neurobiology of Aging Abstract.  Author URL.  Full text.
Challen R, Denny J, Pitt M, Gompels L, Edwards T, Tsaneva-Atanasova K (2019). Artificial intelligence, bias and clinical safety. BMJ Quality & Safety Full text.
Williams CAP, Wedgwood K, Mohammadi H, Prouse K, Tomlinson O, Tsaneva K (2019). Cardiopulmonary Responses to Maximal Aerobic Exercise in Patients with Cystic Fibrosis.  Abstract.  Full text.
Williams CA, Wedgwood KCA, Mohammadi H, Prouse K, Tomlinson OW, Tsaneva-Atanasova K (2019). Cardiopulmonary responses to maximal aerobic exercise in patients with cystic fibrosis. PLoS ONE, 14 Abstract.  Full text.
Prague JK, Voliotis M, Clarke S, Comninos AN, Abbara A, Jayasena CN, Roberts RE, Yang L, Veldhuis JD, Tsaneva-Atanasova K, et al (2019). Determining the relationship between hot flushes and LH pulses in menopausal women using mathematical modelling. The Journal of Clinical Endocrinology & Metabolism Full text.
Słowiński P, Baldemir H, Wood G, Alizadehkhaiyat O, Coyles G, Vine S, Williams G, Tsaneva-Atanasova K, Wilson M (2019). Gaze training supports self-organization of movement coordination in children with developmental coordination disorder. Scientific Reports, 9(1), 1712-1712. Abstract.  Author URL.  Full text.
Buckingham G, Allen K, Vine SJ, Harris DJ, Wood G, Tsaneva-Atanasova K, Wilson MR (2019). Investigating How Prior Knowledge Influences Perception and Action in Developmental Coordination Disorder.  Author URL.
Zavala E, Wedgwood KCA, Voliotis M, Tabak J, Spiga F, Lightman SL, Tsaneva-Atanasova K (2019). Mathematical Modelling of Endocrine Systems. Trends in Endocrinology & Metabolism, 30(4), 244-257. Full text.
Dhillo W, Liang S, Kinghorn A, Voliotis M, Prague J, Veldhuis J, Tsaneva-Atanasova K, McArdle C, Li R, Cass A, et al (2019). Measuring LH Pulsatility in Patients with Reproductive Disorders Using a Novel Robotic Aptamer-Enabled Electrochemical Reader (RAPTER).  Author URL.
Liang S, Kinghorn AB, Voliotis M, Prague JK, Veldhuis JD, Tsaneva-Atanasova K, McArdle CA, Li RHW, Cass AEG, Dhillo WS, et al (2019). Measuring luteinising hormone pulsatility with a robotic aptamer-enabled electrochemical reader. Nature Communications, 10(1). Abstract.  Author URL.  Full text.
Dhillo W, Liang S, Kinghorn A, Voliotis M, Prague J, Veldhuis J, Tsaneva-Atanasova K, McArdle C, Li HWR, Cass T, et al (2019). SAT-LB040 Measuring LH Pulsatility in Patients with Reproductive Disorders Using a Novel Robotic Aptamer-Enabled Electrochemical Reader (RAPTER). Journal of the Endocrine Society, 3(Supplement_1).
Smith P, Buhl E, Tsaneva-Atanasova K, Hodge JJL (2019). Shaw and Shal voltage-gated potassium channels mediate circadian changes in Drosophila clock neuron excitability. The Journal of Physiology Abstract.  Full text.
Voliotis M, Feng Li X, De Burgh R, Lass G, Lightman SL, O’Byrne KT, Tsaneva-Atanasova K (2019). The origin of GnRH pulse generation: an integrative mathematical-experimental approach. Journal of Neuroscience Abstract.  Full text.

2018

Smith P, Arias R, Sonti S, Odgerel Z, Santa-Maria I, McCabe BD, Tsaneva-Atanasova K, Louis ED, Hodge JJL, Clark LN, et al (2018). A Drosophila Model of Essential Tremor. Scientific Reports, 8(1).
Kusev P, Schaik P, Tsaneva-Atanasova K, Juliusson A, Chater N (2018). Adaptive Anchoring Model: How Static and Dynamic Presentations of Time Series Influence Judgments and Predictions. Cognitive science, 42, 77-102. Full text.
Pratap A, Garner KL, Voliotis M, Tsaneva-Atanasova K, McArdle CA (2018). Authors response to communication about mathematical modeling of gonadotropin-releasing hormone signaling. Molecular and Cellular Endocrinology, 470, 36-37. Full text.
Tait L, Wedgwood K, Tsaneva-Atanasova K, Brown JT, Goodfellow M (2018). Control of clustered action potential firing in a mathematical model of entorhinal cortex stellate cells. J Theor Biol, 449, 23-34. Abstract.  Author URL.  Full text.
C. Zhai, F. Alderisio, P. Słowiński, K. Tsaneva-Atanasova, M. di Bernardo (2018). Design and Validation of a Virtual Player for Studying Interpersonal Coordination in the Mirror Game. IEEE Transactions on Cybernetics, 48(3), 1018-1029. Full text.
Tsaneva-Atanasova K, Diaz-Zuccarini V (2018). Editorial: Mathematics for Healthcare as Part of Computational Medicine. Frontiers in Physiology, 9, 985-985.
Voliotis M, Garner KL, Alobaid H, Tsaneva-Atanasova K, McArdle CA (2018). Exploring Dynamics and Noise in Gonadotropin-Releasing Hormone (GnRH) Signaling. In  (Ed) , 405-429.  Abstract.  Author URL.
Wedgwood KCA, Tabak J, Tsaneva-Atanasova K (2018). Modelling Ion Channels. In  (Ed) Mathematical Modelling in Plant Biology, Springer International Publishing, 37-52.
Slowinski P, Al-Ramadhani S, Tsaneva-Atanasova KT (2018). Relaxation oscillations and canards in the Jirsa–Kelso excitator model: global flow perspective. The European Physical Journal Special Topics, 227(5), 591-601. Full text.
Ashwin P, Creaser J, Tsaneva-Atanasova K (2018). Sequential escapes: onset of slow domino regime via a saddle connection. The European Physical Journal Special Topics, 227, 1091-1100. Abstract.  Full text.
Creaser J, Tsaneva-Atanasova, Ashwin P (2018). Sequential noise-induced escapes for oscillatory network dynamics. SIAM Journal on Applied Dynamical Systems, 17(1), 500-525. Abstract.  Full text.

2017

Betterton RT, Broad LM, Tsaneva-Atanasova K, Mellor JR (2017). Acetylcholine modulates gamma frequency oscillations in the hippocampus by activation of muscarinic M1 receptors. European Journal of Neuroscience Full text.
Shen Y, Tino P, Tsaneva-Atanasova K (2017). Classification framework for partially observed dynamical systems. Physical Review E, 95(4), 043303-043303-21. Author URL.  Full text.
Y. Shen, P. Tino, K. Tsaneva-Atanasova (2017). Classification of sparsely and irregularly sampled time series: a learning in model space approach. 2017 International Joint Conference on Neural Networks (IJCNN). 14th - 19th May 2017.
Ashwin P, Creaser J, Tsaneva-Atanasova K (2017). Fast and slow domino regimes in transient network dynamics. Phys Rev E, 96(5-1). Abstract.  Author URL.  Full text.
Garner KL, Tsaneva-Atanasova K, McArdle CA (2017). GnRH Action. In Simoni M, Huhtaniemi I (Eds.) Endocrinology of the Testis and Male Reproduction, Springer International Publishing, 1-36.  Full text.
Voliotis M, Garner KL, Alobaid H, Tsaneva-Atanasova K, McArdle CA (2017). Gonadotropin-releasing hormone signaling: an information theoretic approach. Molecular and Cellular Endocrinology, 463, 106-115. Author URL.  Full text.
Cohen L, Khoramshahi M, Salesse RN, Bortolon C, Slowinski PM, Zhai C, Tsaneva-Atanasova K, di Bernardo M, Capdevielle D, Marin L, et al (2017). Influence of facial feedback and mind perception during a cooperative human-robot task in schizophrenia. Scientific Reports, 7(1), 15023-15023. Full text.
Garner KL, Voliotis M, Alobaid H, Perrett RM, Pham T, Tsaneva-Atanasova K, McArdle CA (2017). Information Transfer via Gonadotropin-Releasing Hormone Receptors to ERK and NFAT: Sensing GnRH and Sensing Dynamics. Journal of the Endocrine Society, 1, 260-277. Full text.
Coste A, Slowiński P, Tsaneva-Atanasova K, Bardy BG, Marin L (2017). Mapping Individual Postural Signatures.
Pratap A, Garner KL, Voliotis M, Tsaneva-Atanasova K, McArdle CA (2017). Mathematical modeling of gonadotropin-releasing hormone signaling. Molecular and Cellular Endocrinology, 449, 42-55. Full text.
Rahi SJ, Larsch J, Pecani K, Katsov AY, Mansouri N, Tsaneva-Atanasova K, Sontag ED, Cross FR (2017). Oscillatory stimuli differentiate adapting circuit topologies. Nature Methods, 14(10), 1010-1016. Abstract.  Author URL.  Full text.
Słowiński P, Alderisio F, Zhai C, Shen Y, Tino P, Bortolon C, Capdevielle D, Cohen L, Khoramshahi M, Billard A, et al (2017). Unravelling socio-motor biomarkers in schizophrenia. npj Schizophrenia, 3(1). Full text.

2016

Booth CA, Witton J, Nowacki J, Tsaneva-Atanasova K, Jones MW, Randall AD, Brown JT (2016). Altered Intrinsic Pyramidal Neuron Properties and Pathway-Specific Synaptic Dysfunction Underlie Aberrant Hippocampal Network Function in a Mouse Model of Tauopathy. J Neurosci, 36(2), 350-363. Abstract.  Author URL.  Full text.
Avitabile D, Słowiński P, Bardy B, Tsaneva-Atanasova K (2016). Beyond in-phase and anti-phase coordination in a model of joint action. Biological Cybernetics, 110(2), 201-216. Abstract.  Author URL.  Full text.
Atherton LA, Prince LY, Tsaneva-Atanasova K (2016). Bifurcation analysis of a two-compartment hippocampal pyramidal cell model. Journal of Computational Neuroscience, 1-16. Abstract.  Full text.
Griffith T, Tsaneva-Atanasova K, Mellor JR (2016). Control of Ca2+ Influx and Calmodulin Activation by SK-Channels in Dendritic Spines. PLoS Comput Biol, 12(5), e1004949-e1004949. Abstract.  Author URL.  Full text.
Zhai C, Alderisio F, Słowiński P, Tsaneva-Atanasova K, di Bernardo M (2016). Design of a Virtual Player for Joint Improvisation with Humans in the Mirror Game. PLoS ONE, 11(4), e0154361-e0154361. Abstract.  Author URL.  Full text.
Słowiński P, Zhai C, Alderisio F, Salesse R, Gueugnon M, Marin L, Bardy BG, di Bernardo M, Tsaneva-Atanasova K (2016). Dynamic similarity promotes interpersonal coordination in joint action. Journal of the Royal Society Interface, 13(116). Abstract.  Author URL.  Full text.
Słowiński P, Tsaneva-Atanasova K, Krauskopf B (2016). Effects of time-delay in a model of intra- and inter-personal motor coordination. The European Physical Journal Special Topics, 225(13), 2591-2600. Abstract.  Author URL.  Full text.
Mina P, Tsaneva-Atanasova K, Bernardo MD (2016). Entrainment and Control of Bacterial Populations: Anin SilicoStudy over a Spatially Extended Agent Based Model. ACS Synthetic Biology, 5(7), 639-653. Full text.
Movassagh M, Alomran N, Mudvari P, Dede M, Dede C, Kowsari K, Restrepo P, Cauley E, Bahl S, Li M, et al (2016). RNA2DNAlign: nucleotide resolution allele asymmetries through quantitative assessment of RNA and DNA paired sequencing data. Nucleic Acids Research Author URL.  Full text.
Wedgwood KCA, Richardson SJ, Morgan NG, Tsaneva-Atanasova K (2016). Spatiotemporal dynamics of insulitis in human type 1 diabetes. Frontiers in Physiology, 7 Abstract.  Full text.

2015

Zhai C, Alderisio A, Tsaneva-Atanasova KT, di Bernardo M (2015). A Model Predictive Approach to Control the Motion of a Virtual Player in the Mirror Game. 54th Annual Conference on Decision and Control (CDC). 15th - 18th Dec 2015. Full text.
Zhai C, Alderisio F, Tsaneva-Atanasova K, di Bernardo M (2015). A model predictive approach to control the motion of a virtual player in the mirror game. 2015 54th IEEE Conference on Decision and Control (CDC). 15th - 18th Dec 2015.
Tamagnini F, Novelia J, Kerrigan TL, Brown JT, Tsaneva-Atanasova KT, Randall AD (2015). Altered intrinsic excitability of hippocampal CA1 pyramidal neurons in aged PDAPP mice. Front. Cell. Neurosci., 9 Full text.
Iosub R, Avitabile D, Grant L, Tsaneva-Atanasova K, Kennedy H (2015). Calcium-Induced Calcium Release during Action Potential Firing in Developing Inner Hair Cells. Biophysical Journal, 108(5), 1003-1012. Author URL.  Full text.
Vine SJ, Uiga L, Lavric A, Moore LJ, Tsaneva-Atanasova K, Wilson MR (2015). Individual reactions to stress predict performance during a critical aviation incident. Anxiety Stress Coping, 28(4), 467-477. Abstract.  Author URL.  Full text.
Garner KL, Perrett RM, Voliotis M, Bowsher C, Pope GR, Pham T, Caunt CJ, Tsaneva-Atanasova K, McArdle CA (2015). Information Transfer in Gonadotropin-releasing Hormone (GnRH) Signaling. Journal of Biological Chemistry, 291(5), 2246-2259. Full text.
Griffith T, Mellor J, Tsaneva-Atanasova K (2015). Spike-Timing Dependent Plasticity (STDP), Biophysical Models. In  (Ed) Encyclopedia of Computational Neuroscience, Springer New York, 2803-2807.
Matyjaszkiewicz A, Venturi E, O’Brien F, Iida T, Nishi M, Takeshima H, Tsaneva-Atanasova KT, Sitsapesan R (2015). Subconductance Gating and Voltage Sensitivity of Sarcoplasmic Reticulum K+ Channels: a Modeling Approach. Biophysical Journal, 109(2), 265-276. Full text.

2014

Zhai C, Alderisio F, Tsaneva-Atanasova K, Di Bernardo M (2014). A novel cognitive architecture for a human-like virtual player in the mirror game. Systems, Man and Cybernetics (SMC), 2014 IEEE International Conference on.  Full text.
Chao Zhai, Alderisio F, Tsaneva-Atanasova K, di Bernardo M (2014). Adaptive tracking control of a virtual player in the mirror game. Decision and Control (CDC), 2014 IEEE 53rd Annual Conference on.  Full text.
Slowinski P, Rooke E, Di Bernardo M, Tsaneva-Atanasova K (2014). Kinematic characteristics of motion in the mirror game. Systems, Man and Cybernetics (SMC), 2014 IEEE International Conference on.  Full text.
Perrett RM, Voliotis M, Armstrong SP, Fowkes RC, Pope GR, Tsaneva-Atanasova K, McArdle CA (2014). Pulsatile Hormonal Signaling to Extracellular Signal-Regulated Kinase: Exploring System Sensitivity to Gonadotropin-Releasing Hormone Pulse Frequency and Width. Journal of Biological Chemistry, 289(11), 7873-7883. Full text.
Griffith T, Mellor J, Tsaneva-Atanasova K (2014). Spike Timing-Dependent Plasticity (STDP), Biophysical Models. In Jaeger D, Jung R (Eds.) Encyclopedia of Computational Neuroscience, Springer New York, 1-5.  Author URL.  Full text.
Perrett R, Voliotis M, Armstrong S, Pope G, Tsaneva-Atanasova K, McArdle C (2014). Systems approaches to understanding GnRH signalling. Endocrine Abstracts, 34

2013

Doyle OM, Tsaneva-Atansaova K, Harte J, Tiffin PA, Tino P, Díaz-Zuccarini V (2013). Bridging Paradigms: Hybrid Mechanistic-Discriminative Predictive Models. Biomedical Engineering, IEEE Transactions on, 60(3), 735-742.
Nowacki J, Osinga HM, Tsaneva-Atanasova KT (2013). Continuation-Based Numerical Detection of After-Depolarization and Spike-Adding Thresholds. Neural Computation, 25(4), 877-900. Abstract.  Full text.
Champneys A, Tsaneva-Atanasova K (2013). Dynamical Systems Theory, Bifurcation Analysis. In Dubitzky W, Wolkenhauer O, Cho K, Yokota H (Eds.) Encyclopedia of Systems Biology, Springer New York, 632-637.  Author URL.
Osinga HM, Tsaneva-Atanasova KT (2013). Geometric analysis of transient bursts. CHAOS, 23(4). Author URL.
Mina P, di Bernardo M, Savery NJ, Tsaneva-Atanasova K (2013). Modelling emergence of oscillations in communicating bacteria: a structured approach from one to many cells. J R Soc Interface, 10(78). Abstract.  Author URL.
Perrett RM, Fowkes RC, Caunt CJ, Tsaneva-Atanasova K, Bowsher CG, McArdle CA (2013). Signaling to extracellular signal-regulated kinase from ErbB1 kinase and protein kinase C: feedback, heterogeneity, and gating. J Biol Chem, 288(29), 21001-21014. Abstract.  Author URL.
Venturi E, Matyjaszkiewicz A, Pitt SJ, Tsaneva-Atanasova K, Nishi M, Yamazaki D, Takeshima H, Sitsapesan R (2013). TRIC-B channels display labile gating: evidence from the TRIC-A knockout mouse model. Pflugers Arch, 465(8), 1135-1148. Abstract.  Author URL.  Full text.
Matyjaszkiewicz A, Venturi E, Yamazaki D, Nishi M, Tsaneva-Atanasova K, Takeshima H, Sitsapesan R (2013). Voltage-Dependent Stochastic Gating Models of TRIC-B Channels.  Author URL.
Tigaret CM, Tsaneva-Atanasova K, Collingridge GL, Mellor JR (2013). Wavelet transform-based de-noising for two-photon imaging of synaptic Ca2+ transients. Biophys J, 104(5), 1006-1017. Abstract.  Author URL.  Full text.

2012

Benjamin O, Fitzgerald TH, Ashwin P, Tsaneva-Atanasova K, Chowdhury F, Richardson MP, Terry JR (2012). A phenomenological model of seizure initiation suggests network structure may explain seizure frequency in idiopathic generalised epilepsy. J Math Neurosci, 2(1). Abstract.  Author URL.  Full text.
Gorochowski TE, Matyjaszkiewicz A, Todd T, Oak N, Kowalska K, Reid S, Tsaneva-Atanasova KT, Savery NJ, Grierson CS, di Bernardo M, et al (2012). BSim: an agent-based tool for modeling bacterial populations in systems and synthetic biology. PLoS ONE, 7(8). Abstract.  Full text.
Marten F, Tsaneva-Atanasova K, Giuggioli L (2012). Bacterial secretion and the role of diffusive and subdiffusive first passage processes. PLoS One, 7(8). Abstract.  Author URL.  Full text.
Granqvist E, Wysham D, Hazledine S, Kozlowski W, Sun J, Charpentier M, Martins TV, Haleux P, Tsaneva-Atanasova K, Downie JA, et al (2012). Buffering capacity explains signal variation in symbiotic calcium oscillations. Plant Physiol, 160(4), 2300-2310. Abstract.  Author URL.
Osinga HM, Sherman A, Tsaneva-Atanasova K (2012). CROSS-CURRENTS BETWEEN BIOLOGY AND MATHEMATICS: THE CODIMENSION OF PSEUDO-PLATEAU BURSTING. Discrete Contin Dyn Syst Ser A, 32(8), 2853-2877. Abstract.  Author URL.
Tsaneva-Atanasova K, Mina P, Caunt CJ, Armstrong SP, McArdle CA (2012). Decoding GnRH neurohormone pulse frequency by convergent signalling modules. J R Soc Interface, 9(66), 170-182. Abstract.  Author URL.
Tsaneva-Atanasova K, Caunt CJ, Armstrong SP, Perrett RM, McArdle CA (2012). Decoding neurohormone pulse frequency by convergent signalling modules. Biochem Soc Trans, 40(1), 273-278. Abstract.  Author URL.
Finch AR, Caunt CJ, Perrett RM, Tsaneva-Atanasova K, McArdle CA (2012). Dual specificity phosphatases 10 and 16 are positive regulators of EGF-stimulated ERK activity: indirect regulation of ERK signals by JNK/p38 selective MAPK phosphatases. Cell Signal, 24(5), 1002-1011. Abstract.  Author URL.
Nowacki J, Osinga HM, Tsaneva-Atanasova K (2012). Dynamical systems analysis of spike-adding mechanisms in transient bursts. J Math Neurosci, 2(1). Abstract.  Author URL.  Full text.
Galfré E, Pitt SJ, Venturi E, Sitsapesan M, Zaccai NR, Tsaneva-Atanasova K, O'Neill S, Sitsapesan R (2012). FKBP12 activates the cardiac ryanodine receptor Ca2+-release channel and is antagonised by FKBP12.6. PLoS One, 7(2). Abstract.  Author URL.  Full text.
Petrovic MM, Nowacki J, Olivo V, Tsaneva-Atanasova K, Randall AD, Mellor JR (2012). Inhibition of post-synaptic Kv7/KCNQ/M channels facilitates long-term potentiation in the hippocampus. PLoS One, 7(2). Abstract.  Author URL.  Full text.
Kusev P, Tsaneva-Atanasova K, van Schaik P, Chater N (2012). Modeling judgment of sequentially presented categories using weighting and sampling without replacement. Behav Res Methods, 44(4), 1129-1134. Abstract.  Author URL.

2011

Nowacki J, Osinga HM, Brown JT, Randall AD, Tsaneva-Atanasova K (2011). A unified model of CA1/3 pyramidal cells: an investigation into excitability. Prog Biophys Mol Biol, 105(1-2), 34-48. Abstract.  Author URL.
Teka W, Tsaneva-Atanasova K, Bertram R, Tabak J (2011). From plateau to pseudo-plateau bursting: making the transition. Bull Math Biol, 73(6), 1292-1311. Abstract.  Author URL.
Kusev P, Ayton P, van Schaik P, Tsaneva-Atanasova K, Stewart N, Chater N (2011). Judgments relative to patterns: how temporal sequence patterns affect judgments and memory. J Exp Psychol Hum Percept Perform, 37(6), 1874-1886. Abstract.  Author URL.
Szalai R, Tsaneva-Atanasova K, Homer ME, Champneys AR, Kennedy HJ, Cooper NP (2011). Nonlinear models of development, amplification and compression in the mammalian cochlea. Philos Trans a Math Phys Eng Sci, 369(1954), 4183-4204. Abstract.  Author URL.

2010

Rackham OJL, Tsaneva-Atanasova K, Ganesh A, Mellor JR (2010). A Ca-Based Computational Model for NMDA Receptor-Dependent Synaptic Plasticity at Individual Post-Synaptic Spines in the Hippocampus. Front Synaptic Neurosci, 2 Abstract.  Author URL.  Full text.
Osinga HM, Tsaneva-Atanasova KT (2010). Dynamics of plateau bursting depending on the location of its equilibrium. J Neuroendocrinol, 22(12), 1301-1314. Abstract.  Author URL.
Walker JJ, Terry JR, Tsaneva-Atanasova K, Armstrong SP, McArdle CA, Lightman SL (2010). Encoding and decoding mechanisms of pulsatile hormone secretion. J Neuroendocrinol, 22(12), 1226-1238. Abstract.  Author URL.
Tsaneva-Atanasova K, Osinga HM, Riess T, Sherman A (2010). Full system bifurcation analysis of endocrine bursting models. J Theor Biol, 264(4), 1133-1146. Abstract.  Author URL.
Tsaneva-Atanasova K, Osinga HM, Tabak J, Pedersen MG (2010). Modeling mechanisms of cell secretion. Acta Biotheor, 58(4), 315-327. Abstract.  Author URL.
Armstrong SP, Caunt CJ, Fowkes RC, Tsaneva-Atanasova K, McArdle CA (2010). Pulsatile and sustained gonadotropin-releasing hormone (GnRH) receptor signaling: does the ERK signaling pathway decode GnRH pulse frequency?. J Biol Chem, 285(32), 24360-24371. Abstract.  Author URL.
Nowacki J, Mazlan S, Osinga HM, Tsaneva-Atanasova K (2010). The role of large-conductance Calcium-activated (BK) channels in shaping bursting oscillations of a somatotroph cell model. Physica D: Nonlinear Phenomena, 239(9), 485-493.

2009

Tsaneva-Atanasova K (2009). A Mathematical Study of Calcium Oscillations and Waves. Abstract.
Tsaneva-Atanasova K, Sherman A (2009). Accounting for near-normal glucose sensitivity in Kir6.2[AAA] transgenic mice. Biophys J, 97(9), 2409-2418. Abstract.  Author URL.
Armstrong SP, Caunt CJ, Fowkes RC, Tsaneva-Atanasova K, McArdle CA (2009). Pulsatile and sustained gonadotropin-releasing hormone (GnRH) receptor signaling: does the Ca2+/NFAT signaling pathway decode GnRH pulse frequency?. J Biol Chem, 284(51), 35746-35757. Abstract.  Author URL.
Tsaneva-Atanasova K, Burgo A, Galli T, Holcman D (2009). Quantifying neurite growth mediated by interactions among secretory vesicles, microtubules, and actin networks. Biophys J, 96(3), 840-857. Abstract.  Author URL.

2007

Tsaneva-Atanasova K, Sherman A, van Goor F, Stojilkovic SS (2007). Mechanism of spontaneous and receptor-controlled electrical activity in pituitary somatotrophs: experiments and theory. J Neurophysiol, 98(1), 131-144. Abstract.  Author URL.
Tsaneva-Atanasova K, Azzopardi N, Galli T, Holcman D (2007). Modeling vesicle trafficking and neurite growth.  Author URL.
Ong HL, Liu X, Tsaneva-Atanasova K, Singh BB, Bandyopadhyay BC, Swaim WD, Russell JT, Hegde RS, Sherman A, Ambudkar IS, et al (2007). Relocalization of STIM1 for activation of store-operated Ca(2+) entry is determined by the depletion of subplasma membrane endoplasmic reticulum Ca(2+) store. J Biol Chem, 282(16), 12176-12185. Abstract.  Author URL.

2006

Sneyd J, Tsaneva-Atanasova K, Reznikov V, Bai Y, Sanderson MJ, Yule DI (2006). A method for determining the dependence of calcium oscillations on inositol trisphosphate oscillations. Proc Natl Acad Sci U S A, 103(6), 1675-1680. Abstract.  Author URL.
Tsaneva-Atanasova K, Nichols C, Arthur S (2006). Accounting for near-normal glucose sensitivity in Kir6.2[AAA] transgenic mice.  Author URL.
Tsaneva-Atanasova K, Zimliki CL, Bertram R, Sherman A (2006). Diffusion of calcium and metabolites in pancreatic islets: killing oscillations with a pitchfork. Biophys J, 90(10), 3434-3446. Abstract.  Author URL.
Bertram R, Sherman A, Nunemaker CS, Luciani DS, Pedersen MG, Zhang M, Tsaneva-Atanasova K, Satin LS (2006). Evidence that calcium feedback and glycolytic oscillations are both important in pancreatic beta-cells: a computational and experimental study.  Author URL.
Nunemaker CS, Bertram R, Sherman A, Tsaneva-Atanasova K, Daniel CR, Satin LS (2006). Glucose modulates [Ca2+]i oscillations in pancreatic islets via ionic and glycolytic mechanisms. Biophys J, 91(6), 2082-2096. Abstract.  Author URL.

2005

Tsaneva-Atanasova K, Shuttleworth TJ, Yule DI, Thompson JL, Sneyd J (2005). Calcium Oscillations and Membrane Transport: the Importance of Two Time Scales. Multiscale Modeling & Simulation, 3(2), 245-264.
Tsaneva-Atanasova K, Yule DI, Sneyd J (2005). Calcium oscillations in a triplet of pancreatic acinar cells. Biophys J, 88(3), 1535-1551. Abstract.  Author URL.
Reznikov V, Sneyd J, Tsaneva-Atanasova K, Yule DI (2005). Dependence of CCK induced Ca-i(2+) oscillations on fluctuations in the cytosolic InsP(3) level.  Author URL.
Nunemaker CS, Zhang M, Bertram R, Sherman A, Tsaneva-Atanasova K, Satin LS (2005). Mouse beta-cells and islets differ in glucose responsiveness.  Author URL.

2004

Sneyd J, Tsaneva-Atanasova K, Yule DI, Thompson JL, Shuttleworth TJ (2004). Control of calcium oscillations by membrane fluxes. Proc Natl Acad Sci U S A, 101(5), 1392-1396. Abstract.  Author URL.

2003

Sneyd J, Tsaneva-Atanasova K, Bruce JIE, Straub SV, Giovannucci DR, Yule DI (2003). A model of calcium waves in pancreatic and parotid acinar cells. Biophys J, 85(3), 1392-1405. Abstract.  Author URL.
Sneyd J, Tsaneva-Atanasova K (2003). Modeling Calcium Waves. In Falcke M, Malchow D (Eds.) Understanding Calcium Dynamics, Springer Berlin Heidelberg, 179-199.  Author URL.

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