Biochemistry
| Module title | Biochemistry |
|---|---|
| Module code | BIO1332 |
| Academic year | 2019/0 |
| Credits | 15 |
| Module staff | Dr Alexis Perry (Convenor) |
| Duration: Term | 1 | 2 | 3 |
|---|---|---|---|
| Duration: Weeks | 11 |
| Number students taking module (anticipated) | 350 |
|---|
Module description
Life is driven by biochemical reactions. Biochemistry is an introductory module providing the essentials for understanding all living processes. You will study protein structure, enzyme kinetics and basic metabolism; understanding how each of these processes function and shape the living cell. Practical sessions offer you vital hands-on experience, learning key techniques and how to apply them. Core biochemical experience is highly relevant to applications in biotechnology and medical science. This module provides the foundation from which you may progress to higher level modules in Metabolism, Analytical Techniques in Biochemistry, Bioinorganic Chemistry, and Pharmacology and Medicinal Chemistry.
In order to take BIO1332 you must normally have an A Level (or equivalent) in Biology. An A Level (or equivalent) in Chemistry is also very useful.
Module aims - intentions of the module
This module aims to teach you core concepts in biochemistry including topics on structure of proteins, enzyme kinetics and metabolic pathways. The module will also provide a background to fundamental aspects of chemistry. This module provides you with the core knowledge and skills to enhance performance in the area of biological chemistry and is a pre-requisite for second year modules in Metabolism, Analytical Techniques in Biochemistry, Bioinorganic Chemistry, and final year modules in Energy Metabolism and in Pharmacology and Medicinal Chemistry.
Graduate attributes: as part of this module you will develop organised analytical skills and group / team work skills.
Intended Learning Outcomes (ILOs)
ILO: Module-specific skills
On successfully completing the module you will be able to...
- 1. Explain the basic concepts of biochemistry
- 2. Recall the range and structures of biological molecules
- 3. Summarise the relationship between chemical structure and biological function
- 4. Identify metabolic pathways
- 5. Communicate key practical skills relating specifically to biochemistry
- 6. Illustrate essential elementary chemistry or structural organic chemistry
ILO: Discipline-specific skills
On successfully completing the module you will be able to...
- 7. Describe the basic principles of biochemistry/chemical biology
- 8. Evaluate essential key facts and theory in a subdiscipline of the biosciences
- 9. Describe and begin to evaluate aspects of biochemistry with reference to textbook material
- 10. With guidance, deploy established techniques of analysis, practical investigation and enquiry within biochemistry
ILO: Personal and key skills
On successfully completing the module you will be able to...
- 11. Communicate ideas effectively by written means
- 12. With some guidance, study independently
- 13. With some guidance, select and properly manage information drawn from books
Syllabus plan
Biochemistry topics will include:
- structure and properties of amino acids;
- mechanisms of protein synthesis;
- primary, secondary, tertiary and quaternary structure of proteins;
- forces which stabilise proteins;
- fibrous and globular proteins;
- proteins as enzymes and enzyme kinetics;
- enzyme regulatory properties;
- enzyme inhibitors and activators;
- glycolysis;
- tricarboxylic acid cycle;
- pentose phosphate pathway and gluconeogenesis;
- thermodynamics;
- energy capture and production by chloroplasts and mitochondria;
- carbon dioxide fixation by photosynthesis;
- synthesis and catabolism of amino acids, fatty acids, purines, pyrimidines and isoprenoids.
Fundamental Aspects of Chemistry topics will include:
- atomic structure and bonding;
- basic reaction chemistry;
- nomenclature
- carbonhybridisation;
- structure and bonding in organic molecules.
Learning activities and teaching methods (given in hours of study time)
| Scheduled Learning and Teaching Activities | Guided independent study | Placement / study abroad |
|---|---|---|
| 39 | 111 | 0 |
Details of learning activities and teaching methods
| Category | Hours of study time | Description |
|---|---|---|
| Scheduled Learning and Teaching | 20 | Lectures |
| Scheduled Learning and Teaching | 12 | Laboratory practicals (4 x 3 hours) |
| Scheduled Learning and Teaching | 7 | Lab-based drop-in feedback/recap/Q&A sessions (7 x 1 hour) |
| Guided Independent Study | 45 | Lecture consolidation and wider reading |
| Guided Independent Study | 14 | Preparation for assessments |
| Guided Independent Study | 25 | Practical report preparation |
| Guided Independent Study | 3 | Virtual learning environment tasks |
| Guided Independent Study | 24 | Revision |
Formative assessment
| Form of assessment | Size of the assessment (eg length / duration) | ILOs assessed | Feedback method |
|---|---|---|---|
| Laboratory skills audit | 4 x 1 hour | 5, 10, 11 | Oral |
Summative assessment (% of credit)
| Coursework | Written exams | Practical exams |
|---|---|---|
| 40 | 60 | 0 |
Details of summative assessment
| Form of assessment | % of credit | Size of the assessment (eg length / duration) | ILOs assessed | Feedback method |
|---|---|---|---|---|
| Practical report 1 and 2 | 20 | Equivalent to 500 words | 9-11 | Written |
| Practical report 3 and 4 | 20 | Equivalent to 500 words | 9-11 | Written |
| MCQ examination | 60 | 1 hour | 1-4, 6-8, 12-13 | Model answers |
Details of re-assessment (where required by referral or deferral)
| Original form of assessment | Form of re-assessment | ILOs re-assessed | Timescale for re-assessment |
|---|---|---|---|
| Practical reports | Not applicable | Not applicable | Not applicable |
| MCQ examination | MCQ examination | 1-4, 6-8, 12-13 | Model answers |
Re-assessment notes
Deferral – if you miss an assessment for certificated reasons judged acceptable by the Mitigation Committee, you will normally be either deferred in the assessment or an extension may be granted. The practical assessments are not deferrable because of their practical nature. The mark given for a re-assessment taken as a result of deferral will not be capped and will be treated as it would be if it were your first attempt at the assessment.
Referral – if you have failed the module overall (i.e. a final overall module mark of less than 40%) you will be required to sit a further examination. The mark given for a re-assessment taken as a result of referral will count for 100% of the final mark and will be capped at 40%.
Indicative learning resources - Basic reading
For Biochemistry lectures:
- Campbell NA, Reece JB (2008) Biology, 8th Ed. Pearson. ISBN 0-321-53616-7/0-321-53616-9 (Core text)
Specialist biochemistry textbooks:
- Berg JM, Tymoczko JL, Stryer L (2012) Biochemistry, 7th Ed., Freeman ISBN 13: 978-1-4292-7635-1, or:
- Voet DJ, Voet JG and Pratt CW (2008) Principles of Biochemistry, 3rd Ed., John Wiley and Sons, ISBN-13 978-0470-23396-2
For Chemistry Lectures:
- Karty J (2005) The Nuts and Bolts of Organic Chemistry: A Student's Guide to Success. Benjamin Cummings ISBN: 0805331174
- Clayden J et al. (2001) Organic Chemistry. Oxford University Press. ISBN 0-19-850346-6
- Hornby M and Peach J (1997) Foundations of Organic Chemistry, Oxford Chemistry Primer, ISBN: 0198556802
Indicative learning resources - Web based and electronic resources
| Credit value | 15 |
|---|---|
| Module ECTS | 7.5 |
| Module pre-requisites | None |
| Module co-requisites | None |
| NQF level (module) | 4 |
| Available as distance learning? | No |
| Origin date | 27/04/2012 |
| Last revision date | 27/09/2018 |
